11/22: Dependent on all updated of TRF being completed OPEN
12/14: Additional test requested data not visible on TR section
TB Testing Updates Target Deadlines
CDPH: Validation schedule for expected TB Testing:
tNGS should be available for ordering in StarLims Production by Jan 1, 2024
11/22/23: Validation in progress (placeholders in place?): Current Target: Jan 31, 2024
WGS: should be available for ordering in StarLims Production by October 1, 2023
11/22/23: WGS not yet in production: Validation will be completed by 11/30/23; SL Production Deployment for WGS: ~12/1/23
11/29/23: ~CA to follow up with LIMS specialist to give updated timeframe by 11/30/23
12/5/23: TB WGS assay moved from StarLIMS testing to staging environment.
PSQ: Will no longer be available for ordering as of December 31, 2023
11/22/23: WGS will be used in place of PSQ; If TNGS is ordered, will manually switch to PSQ
SB: Will PSQ be available for ordering by submitters post Dec? Once WGS is live, PSQ will not be available for submitters to order, but will need to available for lab to use/switch to if TNGS is ordered
CDPH is creating placeholders in production before TNGS is fully validated --
Need to verify PSQ can be returned if TNGS with ICC/Gretl.
WGS go-live--roll out to submitters/ready for ordering:
Webinar for submitters: Jan 2024
Ideal path forward: Go-Live when validation is complete, in SL production, and LWP is ready for production deployment
RISK: TB Testing SHUTS DOWN if PSQ runs out--which may happen in January
Discussion on the timing of web page updates concerning the availability of PSQ and TN for submitters. Consideration of a tiered approach for whole genome sequencing versus TN NGS rollout.
Additional TRF Changes
Next Steps & Action Items
When LWP goes into Production the WGS should be live and in production and http://www.aphl.org/tbdst will be updated for both WGS and TNGS (once in production)
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