Issue 161: Confirm process for tNGS if ordered in LWP prior to being completed in CDPH StarLims Production RESOLVED
12/27: Confirmed that the manual process works
Issue 165: Incorrect mapping of comments and culture type OPEN
12/20: Comments were made in Smartsheet that the fields can not be split. Steven will reach out to LIMS and verified that they are indeed the same stored field in LIMS. Follow up with Katelyn and Varvara
12/27: Updates submitted on smartsheet, will need to follow up with ICC
Issue 168: TRF Update; Submitter Requested test OPEN
12/20: update that the field has been correct
12/27: Issue reopened because this is sometimes not working for Seq DST Code, can’t seem to figure out the pattern
Issue 170: Preapproval question mandatory for mixed non-viable cultures OPEN
Issue 171: User Password asking for reset every time they sign in
User resetting pw everytime they sign on OPEN
Issue 172: TBGenotyping CDC_WGS
TB Testing Updates Target Deadlines
CDPH: Validation schedule for expected TB Testing:
tNGS should be available for ordering in StarLims Production by Jan 1, 2024
11/22/23: Validation in progress (placeholders in place?): Current Target: Jan 31, 2024
WGS: should be available for ordering in StarLims Production by October 1, 2023
12/7/23: Moved to StarLims Production COMPLETE
PSQ: Will no longer be available for ordering as of December 31, 2023
12/6: Verified that the PSQ would return, working similar to a reflex test.
WGS go-live--roll out to submitters/ready for ordering:
Webinar for submitters: Jan 2024
Ideal path forward: Go-Live when validation is complete, in SL production, and LWP is ready for production deployment
12/6: Final package is under review with the Lab Director.
12/20 Approved; Share with CDC , Sync with Vavara
RISK: TB Testing SHUTS DOWN if PSQ runs out--which may happen in January. Enough reagent to March
Discussion on the timing of web page updates concerning the availability of PSQ and TN for submitters. Consideration of a tiered approach for whole genome sequencing versus TN NGS rollout.
Outstanding Questions
Next Steps & Action Items
TB webinar for submitters, need to set a date for training.
12/20: TBD, planning. Target one week out from set go-live date. 1/9 preliminary communication with submitters.
User guide updates: Ann to send most recent Word version , to begin working on updates
12/20: Gretl to review and provide updates. Coordinate timing of release, goal is to have ready to present at webinar and switch to new version
Website: Varvara to work on documents that will drive website changes
12/20: Varvara working on documents ( workflows, etc) to send
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