8/30/23 CA TB LWP Weekly Meeting Notes

Anne Gaynor:

Angela Starks: --

Zenda Berrada:

Sarah Buss:

Lauren Cowan: --

Varvara Kozyreva:

Gretl Glick:

Joan Mangan: --

Mathew Sylvester:

Stephanie Johnston: --

Steven Yu:

Katelyn Chen:

TB LWP: Issue Log

Published Link: https://app.smartsheet.com/b/publish?EQBCT=1136271a8d2e4fa184ebc0833df46742

Smartsheet: https://app.smartsheet.com/sheets/8q4pGFcfXc4mmgCw5Q4CQ43j93G6ChHCjxQ5pGm1

TB Issue Log Notes

• Issue 135, 139, 141: TAT Calculations

  • APHL: Potential edge cases, discussed with CDC (they are aware that there is some variability with TAT calculations if edge cases occur)--proposal: close issues, monitor TAT in production

TB Testing Updates Target Deadlines

• CDPH: Validation schedule for expected TB Testing:

  • tNGS should be available for ordering in StarLims Production by Jan 1, 2024

  • WGS: should be available for ordering in StarLims Production by October 1, 2023

  • PSQ: Will no longer be available for ordering as of December 31, 2023

TB LWP: WGS & tNGS TRF Updates

• Potential proposed phases:

  • Phase 1: Update/test/deploy new TRF and PDF results report

  • Phase 2: Update/test/deploy discrete results parsing

• Pending: Finalized TRF for review/development

Next Steps & Action Items

• APHL: Confirm LWP functionality with ICC

  • If test ordered in LWP, can this trigger different workflows? Yes

  • If WGS is added manually to test panel in StarLims by CDPH lab staff, will the results sync back to the LWP (e.g. be included on the PDF results report for review by submitter)? Yes

• APHL: Assess ICC resource availability, determine development, deployment schedule

• CDPH: Provide updated Test Requisition Form for review to APHL/ICC