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Attendees

APHL/ICC

CDC

CDPH

  •  Anne Gaynor
  •  Angela Starks
  •  Zenda Berrada
  •  Sarah Buss
  •  Lauren Cowan
  •  Varvara Kozyreva
  •  Gretl Glick
  •  Jamie Posey
  •  Mathew Sylvester
  •  Laura Carlton
  •  Stephanie Johnston
  •  Steven Yu
  •  Shawnte George--OOO

  •  Katelyn Chen
  •   Allison Stewart

  •  Amy Tieku
  •  Catherine Evans

  •  Olga Yayloyan

  •  Gina Gouville

  •  Esita Harper

...

Discussion topics: APHL/CDC TB Weekly Checkpoint

Item

Notes

OOOs

Shawnte: Feb 26- March 520

Steven: March 3, 17, 27 (tentative) 28 (tentative), 31

Updated Schedule

Phase 2: Updates for Discrete Results Parsing and Aggregate Report Updates:

Project Schedule Target Production Deployment of 3/30/25 Deadline-At risk

  • Discrete & Aggregate Results Reporting

    • Mapping updates completed by Catherine 2/25/25,

    • Pending updates from Vova --Target: 3/4/25

    • WGS Id update by EOD

      • QC1 Testing:

        • Testing by CDPH in QC1 Week of March 4, 2025

        • Updates applied ICC /re-tested by ICC: Due March 14, 2025

      • SB Testing

        • Updates deployed to SB: March 14

        • CDPH Testing in SB: Week of March 17

        • Updates applied by ICC in SB, retested/confirmed: March 20

        • Deployment to Production: March 27.2025

TB LWP: Issue Log

Published Link: https://app.smartsheet.com/b/publish?EQBCT=1136271a8d2e4fa184ebc0833df46742

Smartsheet: https://app.smartsheet.com/sheets/8q4pGFcfXc4mmgCw5Q4CQ43j93G6ChHCjxQ5pGm1

Issue 198: Subculture Date and Logic

Status
colourRed
titleOpen
Status
colourPurple
titlePost-Enhancement

Issue 200: Aggregate Report Type

Status
colourRed
titleOpen

Issue 201: Discreate Results for Line List

Status
colourRed
titleOpen

Issue 202: Line Listed Isolate

Status
colourRed
titleOpen

Issue 205: Mixed Isolate/Non viable submissions. Disable all test except Sequence - Based DST

Status
colourRed
titleOpen
Status
colourPurple
titlePost- enhancement

  • Issue 205 tested and confirmed by CDPH 2/2/825

Y05 Activities

Requirement Gathering

  • Discrete results and export requirements for WGS and tNGS.

    • CDPH to provide updated reports. Would be similar to current report, but no display of patient information and additional headers

    • Expectations 3 tiles, aggregated, isolate, specimen

    • Lesson Learned: Last go-round, many of the issues that did appear, showed up once the in production- Metrics, mostly internal

2/25/26: Pending updates from Icconect, Proposed schedule at risk

  • CE: Mappings completed! Reports and the grid updates in progress by Vova

    • Mappings Completed in QC1, Reports target to be completed ~March 3, 2025

    • QC1-CDPH connects to SL Test--can do round trip testing in QC1

    • WORKING SESSION:

      • CDPH Round Trip Testing: March 4th, Convert March 5th call-- address any testing feedback and answer questions, vova/catherine will attend

Discrete Results and Aggregate Results Reporting Working Session

  • Status Update: Testing: Pending updates available for testingAdditional working session will be scheduled for week of March 10

  • Testing: 90% of exports are ready

    • All results are present in SL but are not coming into the portal. This is for Vova to review

    • The following fields need to be added to portal: M_TBGenotyping_CDC_WGS and

      TBGIMs_UploadDate

  • Questions:

Issues ready for Sandbox Validation

Tip

Ready for Prod Deployment

TB Testing Updates Target Deadlines

https://app.smartsheet.com/sheets/4FcMGQQ42Jv8x7X67JcQH56Fp5P7FxwRqMjCPjw1?view=grid

Next steps:

  • ICC: Complete Aggregate Report and Discrete Results Report Update in QC1:

    • Target 3/3/25

  • CDPH: Conduct Round trip Testing in QC1 March 4-5, 2025, provide testing feedback

  • Working session to address issues/answer questions: March 5, 2025

...