2024-03-28 LabMCoP Meeting Notes

Date

Mar 28, 2024

Attendees

Present

Name

Organization

Present

Name

Organization

X

Nancy Cornish

CDC

X

Manjula Gama-Ralalage

CDC

X

Riki Merrick

APHL

X

Christina Gallegos

APHL

X

Amy Liu

Inductive Health / APHL

regrets

Raj Dash

Duke / CAP

 

John Snyder

National Library of Medicine (SNOMED CT)

 

Andrea Pitkus

UW

 

Kathy Walsh

Labcorp

 

Rob Hausam

Hausam Consulting

 

Doug York

APHL

 

Pam Banning

 3M

Discussion topics

Topic

Discussed?

Notes

Topic

Discussed?

Notes

Upcoming OOO

Yes

Previous Action Items

 Yes

Specimen CMT - review of terms with questions

 

CALL ADJOURNED

 Yes

1:00 PM ET

Specimen CMT pilot implementers

No

Specimen CMT - Hosting Options

 No

  • How can we publish the content in the dB?

    • Allow access somehow to query the dB

    • as access or excel or csv

    • Using FHIR conceptMap similar to Conceptmap-example-specimen-type - FHIR v6.0.0-cibuild - based on this profile: ConceptMap - FHIR v6.0.0-cibuild

    • @riki.merrick to ask Eric if he still has that or how he built it:

    • ANSWER FROM ERIC:

      • if you look in the xml source Conceptmap-example-specimen-type.xml - FHIR v6.0.0-cibuild . you can see how it is mapped. 

      • I am not sure if you mean the table rendering or creating the concept map from a spreadsheet or CSV file.  The FHIR build tool did the table rendering for that mapping, I think I entered the data by hand, or Grahame did it. It would not be hard to create a script to create a concept map from an excel or csv file if needed.  The table needs to be large enough to make it worthwhile though. you could even create formula cells in the spreadsheet to generate the XML or json for each item. and then copy to a text editor and append to the Metadata fields.

Specimen CMT - education

 No

 

Specimen CMT - tracking implementation impact

  • Setting baseline

  • Define metrics

 No

 

Specimen CMT - Compare to NHS Medical Terminology testing

 No

 

LOINC to SNOMED CT mapping

 No

 

Reporting Biomarkers to Cancer registries

 No

National Program of Cancer Registries (NPCR) | CDC

Sandy will put together a one-pager

Future projects for this call after CMT

 No

  • In general the call is intended as a forum for ANY messaging related issues to work out.

  • In the past we have

    • reviewed containers re-vive that - and how does that interact with devices (UDI identification?)

    • review code systems around additives (HL70371 and SCT substance and product hierarchies)

    • started work on cross-mapping between HL7 method codes and SNOMED CT procedure / technique concepts

      • American College of Surgeons is working on procedure protocol and synoptic data elements / surgical synoptic reports - we could work with them together on that

From Chat:

Manjula Gama Ralalage 12:04 PM
I'll be out next week

vgh5@cdc.gov to Everyone 12:12 PM
jfb-14-00531.pdf

Riki Merrick to Everyone 12:13 PM
https://mdpi-res.com/d_attachment/jfb/jfb-14-00531/article_deploy/jfb-14-00531.pdf?version=1697797445

vgh5@cdc.gov 12:20 PM
neonatal-hsv-1_16_2020.pdf (http://hopkinsmedicine.org )

Recording:

 

https://youtu.be/ma_zinUoKKg

Action items

Quick decisions not requiring context or tracking

For quick, smaller decisions that do not require extra context or formal tracking, use the “Add a decision…” function here.

Decisions requiring context or tracking

For decisions that require more context (e.g., documentation of discussion, options considered) and/or tracking, use the decision template to capture more information.